Defense Notices


All students and faculty are welcome to attend the final defense of EECS graduate students completing their M.S. or Ph.D. degrees. Defense notices for M.S./Ph.D. presentations for this year and several previous years are listed below in reverse chronological order.

Students who are nearing the completion of their M.S./Ph.D. research should schedule their final defenses through the EECS graduate office at least THREE WEEKS PRIOR to their presentation date so that there is time to complete the degree requirements check, and post the presentation announcement online.

Upcoming Defense Notices

Muhammad Momin Rahman

Development of a Signal Flow Graph-Based De-Embedding Framework for Broadband Passive Linear Multiport RF & Microwave Networks with Applications to Power Splitters

When & Where:


Nichols Hall, Room 317 (Richard K. Moore Conference Room)

Committee Members:

Carl Leuschen, Chair
Kenneth Demarest
Fernando Rodriguez-Morales


Abstract

Discrete passive components, including resistors, capacitors, inductors, and transformers, are fundamental to broadband 75-Ω radio-frequency (RF) systems, particularly in cable television (CATV) and hybrid fiber-coaxial (HFC) networks. These components are incorporated into power splitters, couplers, power inserters, and amplifiers to achieve desired frequency responses, impedance matching, and signal transmission characteristics. However, their electrical behavior becomes increasingly complex at higher frequencies due to parasitic resistance, inductance, capacitance, electromagnetic coupling, and distributed transmission-line effects. Consequently, accurate broadband characterization is essential for predicting component behavior and developing representative RF circuit models for simulation purposes.

A significant challenge arises when characterizing passive components with limited or unavailable manufacturer specifications, particularly when existing component inventories must be evaluated for broadband applications. Conventional measurement instruments, including digital multimeters, LCR meters, oscilloscopes, and function generators, generally lack the frequency range required for comprehensive RF characterization from 5 MHz to 3 GHz. Vector network analyzers (VNAs) enable complex scattering-parameter measurements across this frequency range; however, the measured response includes contributions from test fixtures, interconnections, and parasitic discontinuities that must be distinguished from the intrinsic response of the device under test (DUT).

This project investigates the development of a signal flow graph (SFG)-based de-embedding framework for broadband passive linear multiport RF networks. The methodology incorporates series-through and shunt-through DUT (CPWG) fixture configurations, conventional Open-Short and Short-Open de-embedding techniques, followed by lumped-element and distributed transmission-line representations of fixture parasitics. Scattering-parameter and ABCD-parameter analysis are employed to characterize fixture responses, while signal flow graph derivations provide a mathematical basis for analyzing interconnected multiport networks. Particular attention is given to fixture asymmetry, impedance discontinuities, and multiple signal propagation paths that complicate the extension of conventional two-port characterization methods to higher-order networks.

Experimental validation is conducted through the characterization of passive components with published impedance and quality-factor characteristics, enabling comparisons between extracted measurements, equivalent-circuit models, and manufacturer reference data. The methodology is subsequently applied to broadband power splitter networks used in CATV/HFC systems to investigate the accuracy and applicability of the proposed multiport de-embedding framework. The project aims to establish a systematic approach to broadband passive component characterization that integrates fixture modeling, network theory, and experimental measurement while reducing dependence on proprietary characterization data.


Fairuz Shadmani Shishir

Efficient and Privacy-Preserving Biomedical AI: From Precision Therapeutics Design to Private Clinical Prediction

When & Where:


Eaton Hall, Room 2001B

Committee Members:

Sumaiya Shomaji, Chair
Tamzidul Hoque
Cuncong Zhong
Bishnu Sarker
Michael Hageman

Abstract

Accurate protein characterization, precision therapeutics design, and privacy-preserving clinical modeling are important challenges in biomedical artificial intelligence (AI). Addressing these challenges requires computational frameworks that are not only accurate and scalable but also capable of supporting reliable decision-making. This dissertation develops efficient, scalable, and reliable computational frameworks across three areas: Computational characterization of proteins, precision therapeutics design, and privacy-aware clinical representation learning. The first part of this dissertation focuses on efficient protein characterization at both the sequence and residue levels. GPCR-SLM, a knowledge-distilled small protein language model, classifies G-protein-coupled receptors (GPCRs), a family targeted by approximately 35% of FDA-approved drugs. Across 86 families, GPCR-SLM achieves 99% accuracy, outperforming BLAST (86.4%) and HMMER (91%), with a 33.5-fold speedup over large protein language models. Extending characterization to the residue level, a protein-metal-ion binding site prediction framework evaluates five protein language models and incorporates positional encoding to capture long-range dependencies. Under 10-fold cross-validation, it achieves a Matthews correlation coefficient of 0.89, with precision, recall, and F1 scores exceeding 95% across six metal ions.

Building on these protein characterization methods, the second part advances precision therapeutics design through uncertainty quantification and generative learning for therapeutic antibodies. NbBayesLM combines protein language model embeddings and physicochemical descriptors in a Bayesian neural network to predict nanobody thermostability. Evaluated on 10,630 VHH sequences, it achieves a mean absolute error of 1.89C and an R2 of 0.67 while estimating epistemic and aleatoric uncertainty to support candidate prioritization. CIgFlow employs classifier-free guidance to generate de novo, antigen-conditioned antibody sequences without fixed scaffolds or paired structural data. Generated sequences achieve a median OASis humanness score of 0.90 and mean predicted local distance difference test (pLDDT) score of 85.0, demonstrating promising novelty and diversity. The third part addresses privacy-aware clinical modeling using electrocardiograms (ECGs), which encode diagnostic information and sensitive demographic attributes. A variational autoencoder with dual discriminators suppresses demographic information while preserving clinically relevant representations.

Collectively, this dissertation advances efficient protein representation learning, computational antibody design, and privacy-preserving clinical AI, contributing methodological foundations for trustworthy biomedical applications.


Arturo Solorio

Performance Analysis of Mismatched Filtering for Stochastic Waveforms

When & Where:


Nichols Hall, Room 246 (Executive Conference Room)

Committee Members:

Patrick McCormick, Chair
Shannon Blunt
Charles Mohr


Abstract

Mismatched filtering (MMF) is a widely used pulse compression technique that reduces cross-correlation sidelobe levels at the cost of some loss in signal-to-noise ratio (SNR). Applying MMF to stochastically generated radar waveforms makes the filter's performance inherently random, which can be problematic if the variability is excessive. As well as the computational cost being relatively high, as per pulse, a new MMF optimization is required. In this thesis, the feasibility of a fixed MMF strategy for stochastic radar waveforms to reduce computational cost is investigated. Two MMF formulations were evaluated, the optimal MMF (Diagonal Loaded Filter) and a projection-based MMF. Both filters were designed to minimize sidelobe energy within specified regions of the Cross-Ambiguity Function (CAF) for Stochastic Waveform Generation (StoWGe) waveforms, and their performance was assessed across multiple time-bandwidth products and sidelobe-regions for two center frequencies, Fc = 30 Ghz and Fc  = 3.5 Ghz. The MMF performance was characterized using SNR loss and sidelobe depth over hundreds of trails. It is observed that the variability in SNR and sidelobe depth decreases as the waveform time-bandwdith product and the sidelobe region targeted for minimization increase, although the Fc = 3.5 GHz cases exhibited a plateau in achievable sidelobe depth. Additional validation using 1000-trail histograms and loop-back testing confirmed the robustness for the fixed MMF approach for higher time-bandwidth product stochastic waveforms. Where, overall, the results demonstrate that a fixed MMF strategy is feasible for stochastic waveforms when the time-bandwdith product and sidelobe region are sufficiently large. Furthermore, the Projection-based MMF provides a suboptimal alternative to the optimal MMF as it achieves comparable MMF performance when constrained to similar SNR-loss and may be desirable when the size of the domination eigenvalues is small relative to the filter length and can be efficiency obtained.


Past Defense Notices

Dates

ANIRUDH NARASIMMAN

Arcana: Private Tweets on a Public Microblog Platform

When & Where:


250 Nichols Hall

Committee Members:

Bo Luo, Chair
Luke Huan
Prasad Kulkarni


Abstract

As one of the world’s most famous online social networks (OSN), Twitter now has 320 million monthly active users. Accompanying the large user group and abundant personal information, users increasingly realize the vulnerability of tweets and have reservations of showing certain tweets to different follower groups, such as colleagues, friends and other followers. However, Twitter does not offer enough privacy protection or access control functions. Users can just set an account as protected, which results in only the user’s followers seeing the tweet. The protected tweet does not appear in the public domain, third party sites and search engines cannot access the tweet. However, a protected account cannot distinguish between different follower groups or users who use multiple accounts. To serve the demand of the user so that they can restrict the access of each tweet to certain follower groups, we propose a browser plug-in system, which utilizes CP-ABE (Ciphertext Policy Attribute based encryption), allowing the user to select followers based on predefined attributes. Through simple installation and pre-setting, the user can encrypt and decrypt tweets conveniently and can avoid the fear of information leakage.


PRATHAP KUMAR VALSAN

Towards Achieving Predictable Memory Performance on Multi-core Based Mixed Criticality Embedded Systems

When & Where:


250 Nichols Hall

Committee Members:

Heechul Yun, Chair
Esam El-Araby
Prasad Kulkarni


Abstract

The shared resources in multi-core systems, mainly the memory subsystem(caches and DRAM), if not managed properly would affect the predictability of real-time tasks in the presence of co-runners. In this work, we first studied the design of COTS DRAM controllers and its impact on predictability and, proposed a DRAM controller design, called MEDUSA, to provide predictable memory performance in multi-core based real-time systems. In our approach, the OS partially partitions DRAM banks into reserved banks and shared banks. The reserved banks are exclusive to each core to provide predictable timing while the shared banks are shared by all cores to efficiently utilize the resources. MEDUSA has two separate queues for read and write requests, and it prioritizes reads over writes. In processing read requests, MEDUSA employs a two-level scheduling algorithm that prioritizes the memory requests to the reserved banks in a Round Robin fashion to provide strong timing predictability. In processing write requests, MEDUSA largely relies on the FR-FCFS for high throughput. We implemented MEDUSA in a cycle-accurate full-system simulator. The results show that MEDUSA achieves up to 91% better worst-case performance for real-time tasks while achieving up to 29% throughput improvement for non-real-time tasks 

Second, we studied the contention at shared caches and its impact on predictability. We demonstrate that the prevailing cache partition techniques does not necessarily ensure predictable cache performance in modern COTS multi-core platforms that use non-blocking caches to exploit memory-level-parallelism (MLP). Through carefully designed experiments using three real COTS multi-core platforms (four distinct CPU architectures) and a cycle-accurate full system simulator, we show that special hardware registers in non-blocking caches, known as Miss Status Holding Registers (MSHRs), which track the status of outstanding cache-misses, can be a significant source of contention. We propose a hardware and system software (OS) collaborative approach to efficiently eliminate MSHR contention for multi-core real-time systems.We implement the hardware extension in a cycle-accurate full-system simulator and the scheduler modification in Linux 3.14 kernel. In a case study, we achieve up to 19% WCET reduction (average: 13%) for a set of EEMBC benchmarks compared to a baseline cache partitioning setup. 


LEI SHI

Multichannel Sense-and-Avoid Radar for Small UAVs

When & Where:


2001B Eaton Hall

Committee Members:

Chris Allen, Chair
Glenn Prescott
Jim Stiles
Heechul Yun
Lisa Friis

Abstract

This dissertation investigates the feasibility of creating a multichannel sense-and-avoid radar system for small fixed-wing unmanned aerial vehicles (UAVs, also known as sUAS or drones). These aircraft are projected to have a significant impact on the U.S. economy in both the commercial and government sectors, however, their lack of situation awareness has caused the FAA to strictly limit their use. Through this dissertation, a miniature, multichannel, FMCW radar system was created with a small enough size, weight, and power (SWaP) that would allow it to be mounted onboard a sUAS providing inflight target detection. The primary hazard to avoid are general aviation (GA) aircraft such as a Cessna 172 which was estimated to have a radar cross section (RCS) of approximately 1 sqr meter. The radar system is capable of locating potential hazards in range, Doppler, and 3-dimensional space using a patent pending 2-D FFT process and interferometry. The initial prototype system has a detection range of approximately 800 m, with 360-degree azimuth coverage, and +/- 15-degree elevation coverage and draws less than 20 W. From the radar data, target detection, tracking, and the extrapolation of the target behavior in 6-degree of freedom was demonstrated.


RANJITH SOMPALLI

Implementation of Invertebrate Paleontology Knowledge base using Integration of Textual Ontology & Visual Features

When & Where:


2001B Eaton Hall

Committee Members:

Bo Luo, Chair
Jerzy Grzymala-Busse
Richard Wang


Abstract

The Treatise on Invertebrate Paleontology is the most authoritative compilation of the invertebrate fossil records. The quality of studies in paleontology, in particular depends on the accessibility of fossil data. Unfortunately, the PDF version of Treatise currently available is just a scanned copy of the paper publications and the content is in no way organized to facilitate search and knowledge discovery. This project builds an Information Retrieval based system, to extract the fossil descriptions, images and other available information from Treatise. This project is divided into two parts. The first part deals with the extraction of the text and images from the Treatise, organize the information in a structured format and store in a relational database, build a search engine to browse fossil data. Extracting text requires identifying common textual patterns and a text parsing algorithm is developed to identify the patterns and organize the information in a structural format. Images are extracted using the image processing techniques like image segmentation, morphological operations etc., and then associated with the corresponding textual descriptions. A Search engine is built to efficiently browse the extracted information and also the web interface provides options to perform many useful tasks with ease. The second part of this research focuses on the implementation of Content Based Information Retrieval System. All images from treatise are grayscale fossil images and identifying the matching images based on the visual image features is a very difficult task. Hence, we employed an approach that integrates textual and visual features to identify matching images. Textual features are extracted from the description of the fossils and using statistical approaches and Parts of Speech tagging approaches, an ontology is generated, that forms attribute – property pairs explaining how a region looks like in each shell. Popular image features like SIFT, GIST, and HOG features are extracted from fossil images. Both the textual and image features are then integrated to extract the information related to the fossil image matching the query image.


NAGABHUSHANA GARGESHWARI MAHADEVASWAMY

How Duplicates Affect the Error Rate of Data Sets During Validation

When & Where:


2001B Eaton Hall

Committee Members:

Jerzy Grzymala-Busse, Chair
Prasad Kulkarni
Bo Luo


Abstract

In data mining, duplicate data plays a huge role in deciding the set of rules. In this project, an analysis has been made on finding the impact of duplicates in the input data set on the rule set. The effect of duplicates is being analyzed using the error rate factor. Error rate is calculated by comparing the obtained rule set against the testing part of input data. The results of experiments have shown decrement of error rate with the increase of percentage of duplicates in the input data set, which demonstrates that the duplicate data plays a crucial role in validation process of machine learning. LEM2 algorithm and rule checker application have been implemented as a part of project. LEM2 algorithm is used to induce the rule set for the given input data set and rule checker application is used to calculate the error rate.


GOWTHAM GOLLA

Developing Novel Machine Learning Algorithms to Improve Sedentary Assessment for Youth Health Enhancement

When & Where:


2001B Eaton Hall

Committee Members:

Luke Huan, Chair
Jerzy Grzymala-Busse
Jordan Carlson


Abstract

Sedentary behavior of youth is an important determinant of health. However, better measures are needed to improve understanding of this relationship and the mechanisms at play, as well as to evaluate health promotion interventions. Even though wearable devices like accelerometers (e.g. activPAL) are considered as the standard for assessing physical activity in research, the machine learning algorithms that we propose will allow us to re-examine existing accelerometer data to better understand the association between sedentary time and health in various populations. In order to achieve this, we collected two datasets, one is laboratory-controlled dataset and second is free-living dataset. We trained machine learning classifiers on both datasets and compared their behaviors on these datasets. The classifiers predict five postures: sit, stand, sit-stand, stand-sit, and stand\walk. We have also compared manually constructed Hidden Markov model(HMM) with automated HMM from existing software on both datasets to better understand the algorithm and existing software. When we tested on the laboratory-controlled dataset and the free-living dataset, the manually constructed HMM gave more F1-Macro score.


RITANKAR GANGULY

Graph Search Algorithms and Their Applications

When & Where:


2001B Eaton Hall

Committee Members:

Man Kong, Chair
Nancy Kinnersley
Jim Miller


Abstract

Depth- First Search (DFS) and Breadth- First Search are two of the most extensively used graph traversal algorithms to compile information about the graph in linear time. These two graph traversal mechanisms overlay a path to explore further the applications based on them that are widely used in Network Engineering, Web Analytics, Social Networking, Postal Services and Hardware Implementations. The difference between DFS and BFS results in the order in which they explore vertices and the implementation techniques for storing the discovered but un-processed vertices in the graph. BFS algorithm usually needs less time but consumes more computer memory than a DFS implementation. DFS algorithm is based on LIFO mechanism and is implemented using stack. BFS algorithm is based on FIFO technique and is realized using a queue. The order in which the vertices are visited using DFS or BFS can be realized with the help of a tree. The type of graph (directed or undirected) along with the edges of these trees form the basis of all the applications on BFS or DFS. Determining the shortest path between vertices of an un-weighted graph can be used in network engineering to transfer data packets. Checking for the presence of cycle can be critical in minimizing redundancy in telecommunications and is extensively used by social networking websites these days to analyse information as how people are connected. Finding bridges in a graph or determining the set of articulation vertices help minimize vulnerability in network design. Finding the strongly connected components in a graph can be used by model checkers in computer science. Determining an Euler circuit in a graph can be used by the postal service industries and the algorithm can be successfully implemented with linear running time using enhanced data structures. This survey project briefly defines and explains the basics of DFS and BFS traversal and explores some of the applications that are based on these algorithms. 


MICHAEL BLECHA

Implementation of a 2.45GHz Power Amplifier for use in Collision Avoidance Radar

When & Where:


2001B Eaton Hall

Committee Members:

Chris Allen, Chair
Glenn Prescott
Jim Stiles


Abstract

The integration of a RF power amplifier into a Collision Avoidance Radar will increase the maximum detection distance of the radar. Increasing the maximum detection distance will allow a radar system mounted on an Unmanned Aircraft Vehicle to observe obstacles earlier and give the UAV more time to react. The UAVradars project has been miniaturized to support operation on an unmanned aircraft and could benefit from an increase in maximum detection distance. 
The goal of this project is to create a one watt power amplifier for the 2.4GHz-2.5GHz band that can be integrated into the UAVradars project. The amplifier will be powered from existing power supplies in the radar system and must be small and lightweight to support operation on board the UAV in flight. This project will consist of the schematic and layout design, simulations, fabrication, and characterization of the power amplifier. The power amplifier will be designed to fit into the current system with minimal system modifications required. 


HARSHUL ROUTHU

A Comparison of Two Decision Tree Generating Algorithms C4.5 and CART Based on Testing Datasets with Missing Attribute Values

When & Where:


2001B Eaton Hall

Committee Members:

Jerzy Grzymala-Busse, Chair
Prasad Kulkarni
Bo Luo


Abstract

In data mining, missing data are a common occurrence and can have a significant effect on the conclusions that can be drawn from the data. Classification of missing data is a challenging task. One of the most popular techniques for classifying missing data is decision tree induction. 
In this project, we compare two decision tree generating algorithms CART and C4.5 with their original implementations on different datasets with missing attribute values, taken from University of California Irvine (UCI). The comparative analysis of these two implementations is carried out in terms of accuracy on training and testing data, and decision tree complexity based on its depth and size. Results from experiments show that there is statistically insignificant difference between C4.5 and CART in terms of accuracy on testing data and complexity of the decision tree. On the other hand, accuracy on training data is significantly better for CART compared to C4.5. 


HADEEL ALABANDI

A Survey of Metrics Employed to Assess Software Security

When & Where:


246 Nichols Hall

Committee Members:

Prasad Kulkarni, Chair
Andy Gill
Heechul Yun


Abstract

Measuring and assessing software security is a critical concern as it is undesirable to develop risky and insecure software. Various measurement approaches and metrics have been defined to assess software security. For researchers and software developers, it is significant to have different metrics and measurement models at one place either to evaluate the existing measurement approaches, to compare between two or more metrics or to be able to find the proper metric to measure the software security at a specific software development phase. There is no existing survey of software security metrics that covers metrics available at all the software development phases. In this paper, we present a survey of metrics used to assess and measure software security, and we categorized them based on software development phases. Our findings reveal a critical lack of automated tools, and the necessity to possess detailed knowledge or experience of the measured software as the major hindrances in the use of existing software security metrics.